CDS

Accession Number TCMCG057C48393
gbkey CDS
Protein Id XP_018452565.1
Location complement(join(8807715..8808383,8808880..8809074,8809217..8809606))
Gene LOC108823782
GeneID 108823782
Organism Raphanus sativus

Protein

Length 417aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018597063.1
Definition PREDICTED: DNA-binding protein HEXBP-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09250        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016605        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAAAAGCACGATCCAGGTCGAAGAGCTCGACGAATCCGATGATTTCCTCCTCGAACTCGCCGCAATCGAAGCGGAAGCAGAAGCGGCGTCGGCGGCGAAACGCCCTAAGGTCGCCGCTCCCGTCCCTGAGGGACCCTACATGGCGGCTCTAAAGGGAAGCAAAAGCGAGCATTGGCAGATGAATCCGCTCAATCCCGCCTCCAAATCCCGCGGCGGTTTTCAAGGCGTGAACTCGAACCCGGCTGCTGGAAACTACGGATCGGAGGCCGGTGAGCAGGACTTCCCGGAGAAAGACTGTCCCTGTGGAAACGGTGTGTGTTCGATTCTGACGTCGAACACGCAGAAGAACCCAGGCCGAAAATTCTACAAATGCCCTAATAGAGAGGAACACGGAGGTTGTGGGTTTTTCCAGTGGTGTGATGCTGTTCAGTCCTCCGGAGCTCAGCATAGTTATGGGAACAGTAACGAATCCAAGTTCCCTGATCTCCAGTGCCCGTGTGGTGCTGGATTGTGCCGTGTTCTCACTGCTAAAACTGGGGAGAACATTGGAAGGCAGTTCTATCGCTGTCCTGTTTTTGAGGGCTCCTGTGGTTTCTTCAAATGGTGCAATGATGACGCAGTCAAATCGTCTACAACTTATAGCTTTACCAATAACAACAGCTTAAGTGAATCAGATAACAGAGGATATCAAACTGCGAAAACAGGCAGTGGCACACCCTGTTTTAAGTGCGGGAAGGAAGGGCATTGGGCGAGAGACTGCACTGCTCAGTCTGGTAATCCGCCTTATGAAACGGGACCAGTACAGCCTTCCTCTGCAGCTGGACAATGTTATAAGTGTGGGAAGGAAGGGCATTGGGCAAGAGACTGCACTGCTCCGTCTGGTAATCCGCCGTATGAAACGGGACTGGCAAAGCCTTCCTCTGCAGCTGGAGAGTGTTATAAGTGTGGGAAAGAAGGACACTGGGCGAGAGACTGCCCTGCTCAATCTGGTAATCTGAAGTCTGAATCAGGGCAAGTGAAGTCCTCCACTTCAGGCGGAGAGTGTTACAAATGCGGGAAGCAAGGACATTGGGCGAGAGACTGCACCGGTCAATCTGGTAATCAACAGTTTCAATCATCAGGGCAAGGAAAGCCTGCGACCTCGGGTGGAGAATGTTACAAATGCGGAAAACCAGGACACTGGGCAAGAGATTGCACTGTGGCTGTTCAATCCACAGGCGTTACAGGCAAAAGGCAGAGGCAGTACTAG
Protein:  
MEKSTIQVEELDESDDFLLELAAIEAEAEAASAAKRPKVAAPVPEGPYMAALKGSKSEHWQMNPLNPASKSRGGFQGVNSNPAAGNYGSEAGEQDFPEKDCPCGNGVCSILTSNTQKNPGRKFYKCPNREEHGGCGFFQWCDAVQSSGAQHSYGNSNESKFPDLQCPCGAGLCRVLTAKTGENIGRQFYRCPVFEGSCGFFKWCNDDAVKSSTTYSFTNNNSLSESDNRGYQTAKTGSGTPCFKCGKEGHWARDCTAQSGNPPYETGPVQPSSAAGQCYKCGKEGHWARDCTAPSGNPPYETGLAKPSSAAGECYKCGKEGHWARDCPAQSGNLKSESGQVKSSTSGGECYKCGKQGHWARDCTGQSGNQQFQSSGQGKPATSGGECYKCGKPGHWARDCTVAVQSTGVTGKRQRQY